PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_95898g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 316aa    MW: 35624 Da    PI: 9.0676
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_95898g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.76.9e-34481911128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk. 79 
                    lp G++F+Ptd+el+ e+L+ kv+ ++      ++++   i    +i++++P++Lp  ++ +    +fF++ +k+y+tg+rk+r+        t+ 
  MA_95898g0010  48 LPYGVKFDPTDQELI-EHLQGKVAFDNsaahplIDEFIPtIGGEdGICYTHPEKLP-GISRDGLIRHFFHRPSKAYTTGTRKRRKiqtacdesTEg 141
                    699************.99****998886665443332223554436**********.555555677******************867777776334 PP

            NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                    + +W++tgk+++vl+ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  MA_95898g0010 142 ETRWHKTGKTRPVLV-NGKQKGCKKILVLYtnFGKHKKPEKTNWVMHQYHL 191
                    778************.999***********554799999**********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-3935210IPR003441NAC domain
PROSITE profilePS5100533.1948210IPR003441NAC domain
PfamPF023659.7E-1649191IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MLMAGKIRNS TSSSQLIDAK LEEYRIKRCP ACGHQIERRE ALQDWPGLPY GVKFDPTDQE  60
LIEHLQGKVA FDNSAAHPLI DEFIPTIGGE DGICYTHPEK LPGISRDGLI RHFFHRPSKA  120
YTTGTRKRRK IQTACDESTE GETRWHKTGK TRPVLVNGKQ KGCKKILVLY TNFGKHKKPE  180
KTNWVMHQYH LGSQEEEKEG ELVVSKIFYQ TQPRQCNWEK ATYAGDACRA SVTEATQVSE  240
RCTAGESVSS TARHTYNHLE QQTKGTNSSH NLSLAQSRLE SSDQGIDSRS PESTRCTPSF  300
GRGIVGLHRN KDLRVS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1069460.0BT106946.1 Picea glauca clone GQ03101_A16 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010321139.11e-122PREDICTED: uncharacterized protein LOC101262215 isoform X2
RefseqXP_015074957.11e-122PREDICTED: uncharacterized protein LOC107018882 isoform X2
SwissprotO494591e-103NAC73_ARATH; NAC domain-containing protein 73
TrEMBLE0ZFA11e-151E0ZFA1_PICSI; No apical meristem-like protein (Fragment)
STRINGSolyc05g026180.1.11e-120(Solanum lycopersicum)
STRINGPGSC0003DMT4000435211e-121(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5251585
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-123NAC domain containing protein 75